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  •  De-novo assembly
1. CLCbio Genomics Workbench
De novo and reference assembly SNP and small indel detection and annotation.
标签：Genomics, Whole Genome Resequencing, De-novo assembly, SNP discovery, InDel discovery, ChIP-Seq, RNA-Seq,MiRNA, Transcriptomics
2. SeqMan NGen
Sequence assembly software using traditional, next-gen, and third-gen techonologies. Subsequent analysis of the assembly, including SNP discovery, coverage evaluation and consensus annotation is provided through full integration with Lasergene.
标签：Genomics, De-novo assembly, De novo transcriptome assembly,Whole Genome Resequencing, SNP discovery, InDel discovery,ChIP-Seq, RNA-Seq Alignment
3. Forge
De novo assembly using a combination of next-generation and Sanger reads
标签：Genomics, De-novo assembly
4. Geneious
Search, organize and analyze genomic and protein information of any size via desktop program that provides publication ready images to enhance the impact of your research.
标签：Phylogenetics, Sequence analysis, De-novo assembly,Genomics, Population genetics,Metagenomics, Structural variation, RNA-Seq,Epigenomics
5. GenoMiner
A proprietary NGS analysis solution. Powerful hardware comes with preinstalled software, organized in workflows.
标签：Reference assembly, De-novo assembly, ChIP-Seq, RNA-Seq
6. SeqPrep
Strips adapters and optionally merges overlapping paired-end (or paired-end contamination in mate-pair libraries) illumina style reads.
标签：Genomics, De-novo assembly
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